Lab Members

Steven Salzberg Daniela Puiu
Steven Salzberg, Ph.D.
Bloomberg Distinguished Professor of Biomedical Engineering, Computer Science, and Biostatistics
Aleksey Zimin, Ph.D.
Associate Research Scientist, BME
Daniela Puiu, M.S.
Bioinformatics Engineer and Senior Software Engineer
shapeimage_7 Corina Antonescu
Geo Pertea, M.S., M.D.
Bioinformatics Engineer and Senior Software Engineer
Corina Antonescu
Bioinformatics Engineer and Senior Software Engineer
martin_steinegger christopher_pockrandt.jpg
Martin Steinegger, Ph.D. Postdoctoral Fellow

Christopher Pockrandt, Ph.D. Postdoctoral Fellow

AlesVarabyou JenniferLu_cropped.JamiCheng Rachel Sherman
Ales Varabyou, Ph.D. student Jennifer Lu, Ph.D. student Rachel Sherman, Ph.D. student
AlainaShumate sommer_markus-e1558555332368.jpg
 Alaina Shumate, Ph.D. student Markus Sommer, Ph.D. student

Remy Schwab, summer intern

Lab Alumni (former Ph.D. students indicated by *)

Maria Ermolaeva, Ph.D.Former postdoc at TIGR, now an instructor in Hopkins Engineering for Professionals program.

florian_breitwieser Florian Breitwieser, Ph.D.
Senior Bioinformatics Software Engineer, SOPHiA Genetics
ElaPertea *Mihaela (Ela) Pertea, Ph.D.
Associate Professor of Biomedical Engineering and Genetic Medicine, Johns Hopkins University
DaehwanKim_2017 *Daehwan Kim, Ph.D.
Assistant Professor, Dept. of Bioinformatics, UT Southwestern Medical Center
ruibangluo Ruibang Laurent Luo, Ph.D.
Assistant Professor, Dept. of Computer Science, The University of Hong Kong
adelcher Art Delcher, Ph.D.
Research Professor at Hopkins, retired as of July 1, 2016
Valentin Antonescu Valentin Antonescu
Senior Software Engineer at OMIM (Online Mendelian Inheritance in Man), JHU School of Medicine
shapeimage_5 *Derrick Wood, Ph.D.
Principal Bioinformatics Scientist, Personal Genome Diagnostics
RachelCoston Rachel Coston, M.S.E., Software Engineer, Raytheon
shapeimage_6 Stefan Canzar, Ph.D.
Postdoctoral Fellow, 2012-2014. Group Leader, Univ. of Munich
stephan_pabinger2 Stefan Pabinger, Ph.D.
Visiting Postdoctoral Fellow, 2012-2013. Now at the Austrian Inst. of Technology.
ben_langmead_2012_sm *Ben Langmead, Ph.D.
Associate Professor, JHU Computer Science Dept.
shapeimage_4 Tanja Magoc, Ph.D.
Postdoctoral Fellow, 2010-2012. Staff scientist, University of Florida.
shapeimage_1 Liliana Florea, Ph.D.
Associate Professor, McKusick-Nathans Institute of Genetic Medicine and Dept. of Computer Science, JHU
MikeSchatz *Mike Schatz, Ph.D.
Bloomberg Distinguished Associate Professor, JHU Computer Science and Biology
aphillippy *Adam Phillippy, Ph.D.
Principal Investigator, National Human Genome Research Institute, NIH
ColeTrapnell *Cole Trapnell, Ph.D.
Assistant Professor, Genome Sciences, University of Washington
DaveKelley *David Kelley, Ph.D.
Scientist, Calico Labs
ToddTreangen_5 Todd Treangen, Ph.D.
Assistant Professor, Computer Science, Rice University
*Sam Angiuoli, Ph.D.
Chief Information Officer, Personal Genome Diagnostics
shapeimage_10 Arthur Brady, Ph.D.
Staff Scientist, Inst. for Genome Sciences., U. Maryland School of Medicine
henrylin Henry Lin, Ph.D.
Staff Scientist, Philips Research.
shapeimage_11 Carl Kingsford, Ph.D.
Associate Professor, Computational Biology Dept., Carnegie Mellon Univ.
MihaiPop Mihai Pop, Ph.D.
Professor, Computer Science Dept; Director, UMIACS, Univ. of Maryland
<JonathanAllen *Jonathan Allen, Ph.D.
Research Scientist, Lawrence Livermore Natl. Laboratory
shapeimage_12 Bill Majoros, Ph.D.
Assistant Professor, Department of Biostatistics & Bioinformatics, Duke University
droppedImage_1 Carlos Canchaya, Ph.D.
Former visiting postdoctoral fellow. Research Fellow, Universida de Vigo, Spain.
shapeimage_13 Kunmi Ayanbule, Bioinformatics Engineer at CBCB, later at Bluegate.co
Unknown-person Dan Sommer, Bioinformatics Engineer at CBCB, later at Natl. Biodefense and Countermeasures Center (NBACC)
Pawel_Gajer Pawel Gajer, Ph.D.
Bioinformatics Scientist (TIGR), now at Institute of Genome Sciences, U. Maryland School of Medicine
Unknown-person Maria Ermolaeva, former postdoc and Bioinformatics Scientist at TIGR
natalia-volfovsky Natalia Volfovsky, Ph.D.
Former postdoc (TIGR), now at Simons Foundation
olga_troyanskaya Olga Troyanskaya, Ph.D.
Summer intern, 1997 and 1998
Professor, Dept. of Computer Science and Lewis-Sigler Inst. of Integrative Genomics, Princeton University
Deputy Director for Genomics, Flatiron Institute, Simons Foundation, NYC
shapeimage_14 *John Sheppard, Ph.D.
College of Engineering Distinguished Professor, Gianforte School of Computing, Montana State Univ.
sreerama_murthy *Sreerama K. Murthy, Ph.D.
CEO & Chief Data Scientist, Quadratyx